Stem-loop efu-mir-9243c

Accession

MI0028550

Description

Eptesicus fuscus efu-mir-9243c precursor miRNA

Sequence

20621 reads, 201.0 reads per million, 8 experiments

acccaugcaugaacuUCAUGCACCGGGCCUCUAGUguuauauaaauaccagagacccgaugcaugAAAUUCGUGCAAGAGUAG
((.(.((((((((.((((((((.((((.((((.(((((.....))))).)))).)))).)))))))).)))))))).).))..

Structure

--  c a        c        C    C    A     a 
  ac c ugcaugaa uUCAUGCA CGGG CUCU GUguu u
  || | |||||||| |||||||| |||| |||| ||||| a
  UG G ACGUGCUU AAguacgu gccc gaga cauaa u
GA  A A        A        a    a    c     a 

Annotation confidence Low

Genome context

JH977846.1: 369462-369544 [-]

Mature efu-miR-9243c-5p

• Accession: MIMAT0034874
• Description: Eptesicus fuscus efu-miR-9243c-5p mature miRNA
• Sequence: 16 - UCAUGCACCGGGCCUCUAGU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9243c-3p

• Accession: MIMAT0058739
• Description: Eptesicus fuscus efu-miR-9243c-3p mature miRNA
• Sequence: 66 - AAAUUCGUGCAAGAGUAG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545