Stem-loop efu-mir-9259

Accession

MI0028561

Description

Eptesicus fuscus efu-mir-9259 precursor miRNA

Sequence

ggccgcguucUCCUCCAGGACGUGCAGGAGCCUUCcccacaugagugguaacacucaggaagccgccauggccuuggagaagaaccugaacgagg
(..((.(((((.(((((((.((((..((...(((((.....((((((....)))))))))))))..))))..))))))).))))).))..)....

Structure

---- gc  c     C       -A    CA  AGC     ccaca      g 
    g  cg guucU CUCCAGG  CGUG  GG   CUUCc     ugagug u
    |  || ||||| |||||||  ||||  ||   |||||     ||||||  
    c  gu caaga gagguuc  guac  cc   gaagg     acucac a
ggag aa  c     a       cg    cg  ---     -----      a 

Annotation confidence Not enough data

Genome context

JH977641.1: 48151-48245 [-]

Mature efu-miR-9259

• Accession: MIMAT0034879
• Description: Eptesicus fuscus efu-miR-9259 mature miRNA
• Sequence: 11 - UCCUCCAGGACGUGCAGGAGCCUUC - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545