Stem-loop efu-mir-9259

Accession

MI0028561

Description

Eptesicus fuscus efu-mir-9259 precursor miRNA

Sequence

45749 reads, 13521.0 reads per million, 2 experiments

ggccgcguucuccUCCAGGACGUGCAGGAGCCUUCCCCACAugagugguaacacucaggaagccgccauggccUUGGAGAAGAACCUGAACGAGG
(..((.(((((.(((((((.((((..((...(((((.....((((((....)))))))))))))..))))..))))))).))))).))..)....

Structure

---- gc  c     c       -A    CA  AGC     CCACA      g 
    g  cg guucu cUCCAGG  CGUG  GG   CUUCC     ugagug u
    |  || ||||| |||||||  ||||  ||   |||||     ||||||  
    C  GU CAAGA GAGGUUc  guac  cc   gaagg     acucac a
GGAG AA  C     A       cg    cg  ---     -----      a 

Annotation confidence Low

Genome context

JH977641.1: 48151-48245 [-]

Mature efu-miR-9259-5p

• Accession: MIMAT0034879
• Description: Eptesicus fuscus efu-miR-9259-5p mature miRNA
• Sequence: 14 - UCCAGGACGUGCAGGAGCCUUCCCCACA - 41
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9259-3p

• Accession: MIMAT0058740
• Description: Eptesicus fuscus efu-miR-9259-3p mature miRNA
• Sequence: 74 - UUGGAGAAGAACCUGAACGAGG - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545