miRBase entry: efu-mir-9259

Dead hairpin entry

Stem-loop efu-mir-9259


Accession
MI0028561
Description
Eptesicus fuscus efu-mir-9259 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

45749 reads, 13521.0 reads per million, 2 experiments
ggccgcguucuccUCCAGGACGUGCAGGAGCCUUCCCCACAugagugguaacacucaggaagccgccauggccUUGGAGAAGAACCUGAACGAGG
(..((.(((((.(((((((.((((..((...(((((.....((((((....)))))))))))))..))))..))))))).))))).))..)....

Structure
---- gc  c     c       -A    CA  AGC     CCACA      g 
    g  cg guucu cUCCAGG  CGUG  GG   CUUCC     ugagug u
    |  || ||||| |||||||  ||||  ||   |||||     ||||||  
    C  GU CAAGA GAGGUUc  guac  cc   gaagg     acucac a
GGAG AA  C     A       cg    cg  ---     -----      a