Stem-loop efu-mir-9271

Accession

MI0028587

Description

Eptesicus fuscus efu-mir-9271 precursor miRNA

Sequence

5029 reads, 1121.0 reads per million, 2 experiments

cggggcagguucuggagaggguuucuUAGGCUGUAGAGAGUGGAAGAGCCUUAGUUAGGUCAGGAGAUGCUUCAUAGUCcagccccaguu
.(((((.((..(((..(((.(((((((.((((..(..(((.(......))))..)..))))))))))).)))..))).)).)))))....

Structure

---c     a  uu   ga   g       A    GU GA   U GA 
    ggggc gg  cug  gag guuucuU GGCU  A  GAG G  A
    ||||| ||  |||  ||| ||||||| ||||  |  ||| |   
    ccccg cC  GAU  UUC UAGAGGA CUGG  U  UUC C  G
uuga     a  -U   AC   G       -    AU GA   - GA 

Annotation confidence Low

Genome context

JH977757.1: 904498-904587 [-]

Mature efu-miR-9271-5p

• Accession: MIMAT0058746
• Description: Eptesicus fuscus efu-miR-9271-5p mature miRNA
• Sequence: 27 - UAGGCUGUAGAGAGUGGAAGAGCCU - 51
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9271-3p

• Accession: MIMAT0034903
• Description: Eptesicus fuscus efu-miR-9271-3p mature miRNA
• Sequence: 52 - UAGUUAGGUCAGGAGAUGCUUCAUAGUC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545