We have generated a dot-bracket structure for each sequence using RNAfold.
Unambiguous secondary structure.
Parsed and ASCII art drawn.
Want the script? Email us or visit Downloads or something.
--A ---U A - aaua aa
UGAAGGAAA GAC AUUCAUG GGUGG Gcu agaugg g
||||||||| ||| ||||||| ||||| ||| |||||| g
ACUUCUUUU UUG uggguac ccacu cga ucugcc a
CCG UAAU - a ---- ga