Stem-loop efu-mir-33

Accession

MI0028606

Description

Eptesicus fuscus efu-mir-33 precursor miRNA

Sequence

1767 reads, 19.0 reads per million, 8 experiments

ggcagcugugGUGCAUUGUAGUUGCAUUGCauguucuggugguacccaugCAAUGUUUCCACAGUGCAUCAcagaggccug
(((..((((((((((((((.(..((((((((((....(((...)))))))))))))..).))))))))))))))..)))..

Structure

--   ag              A UU          uucu   g 
  ggc  cugugGUGCAUUGU G  GCAUUGCaug    ggu  
  |||  |||||||||||||| |  ||||||||||    ||| g
  ccg  gacACUACGUGACA C  UGUAACguac    cca  
gu   ga              C UU          ----   u 

Annotation confidence High

Genome context

JH977638.1: 400118-400198 [-]

Mature efu-miR-33-5p

• Accession: MIMAT0034921
• Description: Eptesicus fuscus efu-miR-33-5p mature miRNA
• Sequence: 11 - GUGCAUUGUAGUUGCAUUGC - 30
• Evidence: experimental ; Illumina [1]

Mature efu-miR-33-3p

• Accession: MIMAT0058760
• Description: Eptesicus fuscus efu-miR-33-3p mature miRNA
• Sequence: 51 - CAAUGUUUCCACAGUGCAUCA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545