miRBase entry: efu-mir-194-1

Stem-loop efu-mir-194-1

Accession

MI0028609

Description

Eptesicus fuscus efu-mir-194-1 precursor miRNA

Sequence

aguuaucaagUGUAACAGCAACUCCAUGUGGAcugaguaccaauuuccaguggagaugcuguuacuuuugaugguuac
..((((((((.(((((((((.((((((.((((.((.....))...)))))))))).))))))))).))))))))....

Structure

--ag        U         A      G    --c  a 
    uuaucaag GUAACAGCA CUCCAU UGGA   ug g
    |||||||| ||||||||| |||||| ||||   || u
    gguaguuu cauugucgu gaggug accu   ac a
cauu        u         a      -    uua  c

Annotation confidence Not enough data

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Genome context

JH977666.1: 4370823-4370900 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-194-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-194

Accession	MIMAT0034924
Description	Eptesicus fuscus efu-miR-194 mature miRNA
Sequence	11 - UGUAACAGCAACUCCAUGUGGA - 32
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545