Stem-loop efu-mir-9279a-2

Accession

MI0028611

Description

Eptesicus fuscus efu-mir-9279a-2 precursor miRNA

Sequence

978 reads, 28.0 reads per million, 8 experiments

gucugggagaggCCACGCGCCCCUGGGUCCAGGUGAggccacgcgcCCCUGGAUCCGGGUGAGGCCUUgcaccccugg
....(((.((((((...(((((..(((((((((...(((.....))))))))))))))))).))))))...)))....

Structure

gucu   --a      ACG     CU         UGA   c 
    ggg   gaggCC   CGCCC  GGGUCCAGG   ggc a
    |||   ||||||   |||||  |||||||||   ||| c
    ccc   UUCCGG   GUGGG  CCUAGGUCC   Ccg g
gguc   acg      --A     --         ---   c 

Annotation confidence Medium

Genome context

JH977738.1: 167894-167971 [+]

Mature efu-miR-9279a-2-5p

• Accession: MIMAT0058756
• Description: Eptesicus fuscus efu-miR-9279a-2-5p mature miRNA
• Sequence: 13 - CCACGCGCCCCUGGGUCCAGGUGA - 36
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9279a-3p

• Accession: MIMAT0034917
• Description: Eptesicus fuscus efu-miR-9279a-3p mature miRNA
• Sequence: 47 - CCCUGGAUCCGGGUGAGGCCUU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545