Stem-loop efu-mir-9186g-1

Accession

MI0028612

Description

Eptesicus fuscus efu-mir-9186g-1 precursor miRNA

Sequence

65798 reads, 6095.0 reads per million, 3 experiments

uagggggaggUUGGCUGCAUCACUGGUACUGAUGUaauggcuguucaCAGUACCAGAAAUGCCGCucccuucccccuaca
((((((((((..(((.((((..(((((((((.((.(((....))))))))))))))..)))).)))..))))))))))..

Structure

--          UU   U    CA         A  U   g 
  uagggggagg  GGC GCAU  CUGGUACUG UG aau g
  ||||||||||  ||| ||||  ||||||||| || |||  
  aucccccuuc  uCG CGUA  GACCAUGAC ac uug c
ac          cc   C    AA         -  -   u 

Annotation confidence Not enough data

Genome context

JH977753.1: 183165-183244 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from efu-mir-9186g-1

Mature efu-miR-9186g-5p

• Accession: MIMAT0034926
• Description: Eptesicus fuscus efu-miR-9186g-5p mature miRNA
• Sequence: 11 - UUGGCUGCAUCACUGGUACUGAUGU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9186g-1-3p

• Accession: MIMAT0058848
• Description: Eptesicus fuscus efu-miR-9186g-1-3p mature miRNA
• Sequence: 48 - CAGUACCAGAAAUGCCGC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545