miRBase entry: efu-mir-337

Stem-loop efu-mir-337


Accession
MI0028614
Description
Eptesicus fuscus efu-mir-337 precursor miRNA


Sequence

guggggggugagaacggcuucauccaggaguugaugcccaguuauccagCGCCUAGAUGAUGCCUUUCUUCauccccuuca
(.((((((((((((.(((.(((((.(((.(((((((......))).)))).))).))))).))).))).))))))))).).

Structure
- u         -   c   u     c   a    -   cc 
 g gggggguga gaa ggc ucauc agg guug aug  c
 | ||||||||| ||| ||| ||||| ||| |||| |||   
 c uccccuaCU CUU CCG AGUAG UCC Cgac uau  a
a u         U   U   U     A   G    c   ug 


Annotation confidence Not enough data
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Genome context
JH977717.1: 994518-994598 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from efu-mir-337
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-337

Accession MIMAT0034928
Description Eptesicus fuscus efu-miR-337 mature miRNA
Sequence 50 - CGCCUAGAUGAUGCCUUUCUUC - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545