Stem-loop efu-mir-9-2

Accession

MI0028623

Description

Eptesicus fuscus efu-mir-9-2 precursor miRNA

Sequence

9587 reads, 252.0 reads per million, 8 experiments

cccguuucucUCUUUGGUUAUCUAGCUGUAUGAgugccacagagccgucAUAAAGCUAGAUAACCGAAAGUAGAaaugacuc
..(((((((((.(((((((((((((((.(((((..((......))..))))).))))))))))))))))).)))))))....

Structure

--cc       -  C               G     gu  ca 
    cguuucu cU UUUGGUUAUCUAGCU UAUGA  gc  c
    ||||||| || ||||||||||||||| |||||  ||   
    guaaAGA GA AAGCCAAUAGAUCGA AUAcu  cg  a
cuca       U  -               A     gc  ag 

Annotation confidence Medium

Genome context

JH977860.1: 169282-169363 [-]

Mature efu-miR-9-5p

• Accession: MIMAT0034937
• Description: Eptesicus fuscus efu-miR-9-5p mature miRNA
• Sequence: 11 - UCUUUGGUUAUCUAGCUGUAUGA - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9-3p

• Accession: MIMAT0034938
• Description: Eptesicus fuscus efu-miR-9-3p mature miRNA
• Sequence: 50 - AUAAAGCUAGAUAACCGAAAGUAGA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545