Stem-loop efu-mir-29c

Accession

MI0028626

Description

Eptesicus fuscus efu-mir-29c precursor miRNA

Sequence

40088 reads, 423.0 reads per million, 8 experiments

uuacacaggcUGACCGAUUUCUCCUGGUGUUCagagucuguuuuuguCUAGCACCAUUUGAAAUCGGUUAUGauguaggggg
(((((((...(((((((((((...(((((((.(((...........))))))))))...))))))))))))).)))))....

Structure

----     -  ggc           UCC       C   gucu 
    uuaca ca   UGACCGAUUUC   UGGUGUU aga    g
    ||||| ||   |||||||||||   ||||||| |||    u
    gaugu GU   AUUGGCUAAAG   ACCACGA UCu    u
gggg     a  ---           UUU       -   guuu 

Annotation confidence High

Genome context

JH977644.1: 16086529-16086610 [+]

Mature efu-miR-29c-5p

• Accession: MIMAT0058768
• Description: Eptesicus fuscus efu-miR-29c-5p mature miRNA
• Sequence: 11 - UGACCGAUUUCUCCUGGUGUUC - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-29c-3p

• Accession: MIMAT0034941
• Description: Eptesicus fuscus efu-miR-29c-3p mature miRNA
• Sequence: 48 - CUAGCACCAUUUGAAAUCGGUUAUG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545