miRBase entry: efu-mir-9186h-1

Stem-loop efu-mir-9186h-1


Accession
MI0028636
Description
Eptesicus fuscus efu-mir-9186h-1 precursor miRNA


Sequence

uagggggaggUUGGCUGCAUCACUGGUACUGAGGUaauggcuguucacaguaccagacaugcggccaccuucccccuaca
((((((((((.(((((((((..(((((((((.((..........)).)))))))))..))))))))).))))))))))..

Structure
--          U         CA         A  Uaau 
  uagggggagg UGGCUGCAU  CUGGUACUG GG    g
  |||||||||| |||||||||  ||||||||| ||     
  aucccccuuc accggcgua  gaccaugac cu    g
ac          c         ca         a  uguc 


Annotation confidence Not enough data
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Genome context
JH977753.1: 69615-69694 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-9186h-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9186h

Accession MIMAT0034951
Description Eptesicus fuscus efu-miR-9186h mature miRNA
Sequence 11 - UUGGCUGCAUCACUGGUACUGAGGU - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545