miRBase entry: efu-mir-9293

Stem-loop efu-mir-9293

Accession

MI0028638

Description

Eptesicus fuscus efu-mir-9293 precursor miRNA

Sequence

ucccaaagucuucuauggauguugaaguucagccucacaucaaaagGCAACAGACUCACGUCCAGAuuggggugaa
(((((..((((.....((((((.((.(((..((((.........))))....))))))))))))))))))))....

Structure

----     aa    ucuau      u  a   --ca    cac 
    uccca  gucu     ggaugu ga guu    gccu   a
    |||||  ||||     |||||| || |||    ||||   u
    ggggu  uAGA     CCUGCA CU CAG    CGga   c
aagu     --    -----      -  -   ACAA    aaa

Annotation confidence Not enough data

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Genome context

JH977669.1: 3482441-3482516 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9293

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-9293

Accession	MIMAT0034953
Description	Eptesicus fuscus efu-miR-9293 mature miRNA
Sequence	47 - GCAACAGACUCACGUCCAGA - 66
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545