Stem-loop efu-mir-9296

Accession

MI0028642

Description

Eptesicus fuscus efu-mir-9296 precursor miRNA

Sequence

195 reads, 38.0 reads per million, 2 experiments

gcucugggccUCCAGCUUGUGGAACAGGUCuugccaggccagguccUGGAAGAAGCUGUUGUAGccauaaugcacgaagcccaggugcc
(((((((((.((..(((((((((((((.((((.(((((......)))))))))..)))))....)))))).))..)).))))))).)).

Structure

-  -       c  CA  -      ----     -G    g     cc 
 gc ucugggc UC  GC UUGUGG    AACAG  UCuu ccagg  a
 || ||||||| ||  || ||||||    |||||  |||| |||||   
 cg ggacccg ag  cg aauacc    UUGUC  AGAA GGUcc  g
c  u       a  ca  u      GAUG     GA    -     ug 

Annotation confidence Low

Genome context

JH979538.1: 473-561 [-]

Mature efu-miR-9296-5p

• Accession: MIMAT0034957
• Description: Eptesicus fuscus efu-miR-9296-5p mature miRNA
• Sequence: 11 - UCCAGCUUGUGGAACAGGUC - 30
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9296-3p

• Accession: MIMAT0058778
• Description: Eptesicus fuscus efu-miR-9296-3p mature miRNA
• Sequence: 47 - UGGAAGAAGCUGUUGUAG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545