Stem-loop efu-mir-9186q

Accession

MI0028644

Description

Eptesicus fuscus efu-mir-9186q precursor miRNA

Sequence

3156 reads, 166.0 reads per million, 4 experiments

uagggggaggGAGGUGGCAUGGCUGGUAGUAUGguaauggcuacccaUAACUGCCAGACAUGCCACCUUccucacccuaca
(((((.(((((((((((((((.((((((((((((..........)))).)))))))).))))))))))))))).)))))..

Structure

--     g               G        -    uaau 
  uaggg gaggGAGGUGGCAUG CUGGUAGU AUGg    g
  ||||| ||||||||||||||| |||||||| ||||     
  auccc cuccUUCCACCGUAC GACCGUCA Uacc    g
ac     a               A        A    cauc 

Annotation confidence High

Genome context

JH977753.1: 53189-53269 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9186q

Mature efu-miR-9186q-5p

• Accession: MIMAT0034959
• Description: Eptesicus fuscus efu-miR-9186q-5p mature miRNA
• Sequence: 11 - GAGGUGGCAUGGCUGGUAGUAUG - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9186q-3p

• Accession: MIMAT0058779
• Description: Eptesicus fuscus efu-miR-9186q-3p mature miRNA
• Sequence: 48 - UAACUGCCAGACAUGCCACCUU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545