miRBase entry: efu-mir-9186m

Stem-loop efu-mir-9186m


Accession
MI0028645
Description
Eptesicus fuscus efu-mir-9186m precursor miRNA


Sequence

agggugagggUUGCGGUUUUGCUGGUACUGAGGUaauaccugcccccaguaccagaaaugccgccauccuccuccuac
((((.((((((.(((((....(((((((((.((((.....))))..)))))))))....))))).)))))).))))..

Structure
--    u      U     UUUG         -A    a 
  aggg gagggU GCGGU    CUGGUACUG  GGUa u
  |||| |||||| |||||    |||||||||  |||| a
  uccu cuccua cgccg    gaccaugac  ccgu c
ca    c      c     uaaa         cc    c 


Annotation confidence Not enough data
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Genome context
JH977753.1: 50574-50651 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from efu-mir-9186m
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9186m

Accession MIMAT0034960
Description Eptesicus fuscus efu-miR-9186m mature miRNA
Sequence 11 - UUGCGGUUUUGCUGGUACUGAGGU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545