Stem-loop efu-mir-9186m

Accession

MI0028645

Description

Eptesicus fuscus efu-mir-9186m precursor miRNA

Sequence

7978 reads, 1161.0 reads per million, 2 experiments

agggugagggUUGCGGUUUUGCUGGUACUGAGGUaauaccugccccCAGUACCAGAAAUGCCGCCAUCcuccuccuac
((((.((((((.(((((....(((((((((.((((.....))))..)))))))))....))))).)))))).))))..

Structure

--    u      U     UUUG         -A    a 
  aggg gagggU GCGGU    CUGGUACUG  GGUa u
  |||| |||||| |||||    |||||||||  |||| a
  uccu cucCUA CGCCG    GACCAUGAC  ccgu c
ca    c      C     UAAA         cc    c 

Annotation confidence Medium

Genome context

JH977753.1: 50574-50651 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from efu-mir-9186m

Mature efu-miR-9186m-5p

• Accession: MIMAT0034960
• Description: Eptesicus fuscus efu-miR-9186m-5p mature miRNA
• Sequence: 11 - UUGCGGUUUUGCUGGUACUGAGGU - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9186m-3p

• Accession: MIMAT0058780
• Description: Eptesicus fuscus efu-miR-9186m-3p mature miRNA
• Sequence: 47 - CAGUACCAGAAAUGCCGCCAUC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545