Stem-loop efu-mir-30a

Accession

MI0028658

Description

Eptesicus fuscus efu-mir-30a precursor miRNA

Sequence

6969743 reads, 68254.0 reads per million, 8 experiments

cagugagcaacUGUAAACAUCCUCGACUGGAAGCUgugaggccacagauggGCUUUCAGUCGGAUGUUUGCAGCUgccuacugcc
(((((.(((.((((((((((((..((((((((((((((....))).....))))))))))))))))))))))).))).)))))..

Structure

--     a   a            UC           -----   a 
  cagug gca cUGUAAACAUCC  GACUGGAAGCU     gug g
  ||||| ||| ||||||||||||  |||||||||||     |||  
  gucau cgU GACGUUUGUAGG  CUGACUUUCGg     cac g
cc     c   C            --           guaga   c 

Annotation confidence High

Genome context

JH977611.1: 11968515-11968599 [-]

Mature efu-miR-30a-5p

• Accession: MIMAT0058788
• Description: Eptesicus fuscus efu-miR-30a-5p mature miRNA
• Sequence: 12 - UGUAAACAUCCUCGACUGGAAGCU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-30a-3p

• Accession: MIMAT0034973
• Description: Eptesicus fuscus efu-miR-30a-3p mature miRNA
• Sequence: 52 - GCUUUCAGUCGGAUGUUUGCAGCU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545