Stem-loop efu-mir-19

Accession

MI0028679

Description

Eptesicus fuscus efu-mir-19 precursor miRNA

Sequence

44335 reads, 1467.0 reads per million, 8 experiments

uacuuacgauuAGUUUUGCAGGUUUGCAUuucagcguauauauguauauauggCUGUGCAAAUCCAUGCAAAACUGAUugugauaaug
...(((((((((((((((((((((((((...((((.((((((....)))))))))))))))).)).))))))))))))))))).....

Structure

--uac                 -  -      Uuu    g      u 
     uuacgauuAGUUUUGCA GG UUUGCA   cagc uauaua g
     ||||||||||||||||| || ||||||   |||| ||||||  
     aguguUAGUCAAAACGU CC AAACGU   GUCg guauau u
guaau                 A  U      ---    -      a 

Annotation confidence High

Genome context

JH977765.1: 950805-950892 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-19

Mature efu-miR-19-5p

• Accession: MIMAT0058793
• Description: Eptesicus fuscus efu-miR-19-5p mature miRNA
• Sequence: 12 - AGUUUUGCAGGUUUGCAU - 29
• Evidence: experimental ; Illumina [1]

Mature efu-miR-19-3p

• Accession: MIMAT0034994
• Description: Eptesicus fuscus efu-miR-19-3p mature miRNA
• Sequence: 54 - CUGUGCAAAUCCAUGCAAAACUGAU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545