miRBase entry: efu-mir-17

Stem-loop efu-mir-17

Accession

MI0028684

Description

Eptesicus fuscus efu-mir-17 precursor miRNA

Sequence

ucagaguaaugucaaagugcuuacagugcagguagugauaugugcaucuACUGCAGUGAAGGCACUUGUAGCAUuauggugaca
(((..(((((((..((((((((.((.(((((.(((((.......)).)))))))).)).))))))))...)))))))..)))..

Structure

--   ga       -ca        a  g     g   -  au 
  uca  guaaugu   aagugcuu ca ugcag uag ug  a
  |||  |||||||   |||||||| || ||||| ||| ||  u
  agu  uauUACG   UUCACGGA GU ACGUC Auc ac  g
ac   gg       AUG        A  G     -   u  gu

Annotation confidence Not enough data

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Genome context

JH977750.1: 95455-95538 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from efu-mir-17

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-17

Accession	MIMAT0034999
Description	Eptesicus fuscus efu-miR-17 mature miRNA
Sequence	50 - ACUGCAGUGAAGGCACUUGUAGCAU - 74
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545