Stem-loop efu-mir-9317

Accession

MI0028685

Description

Eptesicus fuscus efu-mir-9317 precursor miRNA

Sequence

44989 reads, 13320.0 reads per million, 2 experiments

gaaaUACUGUGAUUUUCUUUGGGAACCUGGAcuguucucugcccacgccggagcUGAGUCUAAGAGAAAAGCACacacugcccu
.......((((.((((((((.......((((((...((((((....).)))))...)))))))))))))).)))).........

Structure

--gaaaUAC    A        GGGAACC      guu     - c 
         UGUG UUUUCUUU       UGGAcu   cucug c c
         |||| ||||||||       ||||||   ||||| |  
         aCAC AAAAGAGA       AUCUGA   gaggc g a
ucccgucac    G        -------      GUc     c c 

Annotation confidence Low

Genome context

JH977928.1: 317182-317265 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9317

Mature efu-miR-9317-5p

• Accession: MIMAT0058798
• Description: Eptesicus fuscus efu-miR-9317-5p mature miRNA
• Sequence: 5 - UACUGUGAUUUUCUUUGGGAACCUGGA - 31
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9317-3p

• Accession: MIMAT0035000
• Description: Eptesicus fuscus efu-miR-9317-3p mature miRNA
• Sequence: 55 - UGAGUCUAAGAGAAAAGCAC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545