Stem-loop efu-mir-181f

Accession

MI0028693

Description

Eptesicus fuscus efu-mir-181f precursor miRNA

Sequence

1101416 reads, 11867.0 reads per million, 8 experiments

gacuccaaggAACAUUCAACGCUGUCGGUGAGUuugggauuugaaaaaACCACCGACCGUUGACUGUACCuugggcuccu
((.(((((((.(((.((((((..(((((((.((((...........))))))))))))))))).))).))))))).))..

Structure

--  c       A   U      CU       A    ggga 
  ga uccaagg ACA UCAACG  GUCGGUG GUuu    u
  || ||||||| ||| ||||||  ||||||| ||||    u
  cu ggguuCC UGU AGUUGC  CAGCCAC CAaa    u
uc  c       A   C      --       -    aaag 

Annotation confidence High

Genome context

JH977726.1: 2031528-2031607 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-181f

Mature efu-miR-181f-5p

• Accession: MIMAT0058806
• Description: Eptesicus fuscus efu-miR-181f-5p mature miRNA
• Sequence: 11 - AACAUUCAACGCUGUCGGUGAGU - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-181f-3p

• Accession: MIMAT0035008
• Description: Eptesicus fuscus efu-miR-181f-3p mature miRNA
• Sequence: 49 - ACCACCGACCGUUGACUGUACC - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545