miRBase entry: efu-mir-9319

Stem-loop efu-mir-9319

Accession

MI0028694

Description

Eptesicus fuscus efu-mir-9319 precursor miRNA

Sequence

ugacuucuggAGCAGAGCUAGUGGCCUGAGGUCccauggaggcuuagagaccccacccaccagcccagucccuguucccagaguaggc
..((((..(((((((.(((.((((..((.(((((...(....)...).)))).)).)))).))).......)))))))..))))....

Structure

--ug    cu       ------A   A    CC  A    - cau g 
    acuu  ggAGCAG       GCU GUGG  UG GGUC c   g a
    ||||  |||||||       ||| ||||  || |||| |   |  
    ugag  ccuuguc       cga cacc  ac ccag g   c g
cgga    ac       ccugacc   c    -c  c    a auu g

Annotation confidence Not enough data

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Genome context

JH977736.1: 3748037-3748124 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9319

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-9319

Accession	MIMAT0035009
Description	Eptesicus fuscus efu-miR-9319 mature miRNA
Sequence	11 - AGCAGAGCUAGUGGCCUGAGGUC - 33
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545