miRBase entry: efu-mir-200a

Stem-loop efu-mir-200a

Accession

MI0028698

Description

Eptesicus fuscus efu-mir-200a precursor miRNA

Sequence

gccccugugggcaucuuaccggacagugcuggauuaucggcuugacucUAACACUGUCUGGUAACGAUGUUCaaaggugacc
...(((.(((((((((((((((((((((.(((((((......))).)))).))))))))))))).)))))))).))).....

Structure

--gcc   g        -             c    -   uc 
     ccu ugggcauc uuaccggacagug ugga uua  g
     ||| |||||||| ||||||||||||| |||| |||   
     gga aCUUGUAG AAUGGUCUGUCAC AUcu agu  g
ccagu   a        C             A    c   uc

Annotation confidence Not enough data

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Genome context

JH977681.1: 208600-208681 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from efu-mir-200a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-200a

Accession	MIMAT0035013
Description	Eptesicus fuscus efu-miR-200a mature miRNA
Sequence	49 - UAACACUGUCUGGUAACGAUGUUC - 72
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545