miRBase entry: efu-mir-429

Stem-loop efu-mir-429

Accession

MI0028699

Description

Eptesicus fuscus efu-mir-429 precursor miRNA

Sequence

ugugaugggcgucuuaccagacacgguuagaccuggguccuucuguCUAAUACUGUCUGGUAAUGCCGUccauccacgg
(((((((((((.(((((((((((..(((((((..(((....))))))))))..)))))))))).).))))))).)))).

Structure

-    -       u -          cg       cu   u 
 ugug augggcg c uuaccagaca  guuagac  ggg c
 |||| ||||||| | ||||||||||  |||||||  |||  
 gcac uaccUGC G AAUGGUCUGU  UAAUCug  ucu c
g    c       C U          CA       --   u

Annotation confidence Not enough data

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Genome context

JH977681.1: 209798-209876 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from efu-mir-429

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-429

Accession	MIMAT0035014
Description	Eptesicus fuscus efu-miR-429 mature miRNA
Sequence	47 - CUAAUACUGUCUGGUAAUGCCGU - 69
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545