miRBase entry: efu-let-7f

Stem-loop efu-let-7f

Accession

MI0028702

Description

Eptesicus fuscus efu-let-7f precursor miRNA

Sequence

ucuaucagagUGAGGUAGUAGAUUGUAUAGUUGUGggguaguuauuuuacccuguucaggagauaacuauacaaucuauugccuucccugcggaguag
(((..(((.(.((((((((((((((((((((((((((((((.....))))))).........))))))))))))))))))))))).)))).)))....

Structure

----   au   a U                       ---------       u 
    ucu  cag g GAGGUAGUAGAUUGUAUAGUUGU         Gggguag u
    |||  ||| | |||||||||||||||||||||||         ||||||| a
    agg  guc c uuccguuaucuaacauaucaaua         ucccauu u
gaug   -c   - c                       gaggacuug       u

Annotation confidence Not enough data

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Genome context

JH977714.1: 1024362-1024459 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-let-7f

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-let-7f

Accession	MIMAT0035017
Description	Eptesicus fuscus efu-let-7f mature miRNA
Sequence	11 - UGAGGUAGUAGAUUGUAUAGUUGUG - 35
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545