Stem-loop efu-mir-146

Accession

MI0028705

Description

Eptesicus fuscus efu-mir-146 precursor miRNA

Sequence

177092 reads, 2078.0 reads per million, 8 experiments

caccuggcucUGAGAACUGAAUUCCAUAGGCUGUgagcucuagcaaaUGCCCUAGGGACUCAGUUCUGGUgcccggcugu
..((.(((.((.((((((((.((((.((((.(((..((....))..))).)))))))).)))))))))).))).))....

Structure

--ca  u   u  G        A    A    C   ga  u 
    cc ggc cU AGAACUGA UUCC UAGG UGU  gc c
    || ||| || |||||||| |||| |||| |||  ||  
    gg ccg GG UCUUGACU AGGG AUCC GUa  cg u
uguc  c   U  -        C    -    C   aa  a 

Annotation confidence High

Genome context

JH977636.1: 5973083-5973162 [+]

Mature efu-miR-146-5p

• Accession: MIMAT0058813
• Description: Eptesicus fuscus efu-miR-146-5p mature miRNA
• Sequence: 11 - UGAGAACUGAAUUCCAUAGGCUGU - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-146-3p

• Accession: MIMAT0035020
• Description: Eptesicus fuscus efu-miR-146-3p mature miRNA
• Sequence: 48 - UGCCCUAGGGACUCAGUUCUGGU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545