miRBase entry: efu-mir-379

Stem-loop efu-mir-379

Accession

MI0028717

Description

Eptesicus fuscus efu-mir-379 precursor miRNA

Sequence

ccugaagagaUGGUAGACUAUGGAACGUAGGCUUUgugauuuuugaccuauguaacaugguccacuaacucucaguauc
.((((.(((.((((.(((((((..((((((((............).)))))))..))))))).)))).)))))))....

Structure

---c    a   a    A       GA       - UUUgu 
    cuga gag UGGU GACUAUG  ACGUAGG C     g
    |||| ||| |||| |||||||  ||||||| |      
    gacu cuc auca cugguac  uguaucc g     a
cuau    -   a    c       aa       a uuuuu

Annotation confidence Not enough data

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Genome context

JH977717.1: 870016-870094 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from efu-mir-379

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-379

Accession	MIMAT0035032
Description	Eptesicus fuscus efu-miR-379 mature miRNA
Sequence	11 - UGGUAGACUAUGGAACGUAGGCUUU - 35
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545