miRBase entry: efu-mir-485

Stem-loop efu-mir-485

Accession

MI0028723

Description

Eptesicus fuscus efu-mir-485 precursor miRNA

Sequence

guacuuggagagaggcuggccgugaugaauucgauucaucaaagcgaGUCAUACACGGCUCUCCUCUCUuuuaguauca
(((((.(((((((((..(((((((((((.((((...........)))))))).)))))))..))))))))).)))))..

Structure

--     u         cu       -    a    auuc 
  guacu ggagagagg  ggccgug auga uucg    a
  ||||| |||||||||  ||||||| |||| ||||    u
  uauga uuUCUCUCC  UCGGCAC UACU Gagc    c
ac     u         UC       A    -    gaaa

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

JH977717.1: 841215-841293 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from efu-mir-485

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-485

Accession	MIMAT0035038
Description	Eptesicus fuscus efu-miR-485 mature miRNA
Sequence	48 - GUCAUACACGGCUCUCCUCUCU - 69
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545