miRBase entry: efu-mir-154

Stem-loop efu-mir-154

Accession

MI0028724

Description

Eptesicus fuscus efu-mir-154 precursor miRNA

Sequence

guccuugaggAGAGGUCUUCCAUGAUGCAUUCACUguacucguagcugaaucauacaugguagaccuguuuucaaguauca
...((((((((.((((((.((((((((.((((((((......))).)))))))).))))).)))))).)))))))).....

Structure

--guc        G      U     -   C     -   ua 
     cuugaggA AGGUCU CCAUG AUG AUUCA CUg  c
     |||||||| |||||| ||||| ||| ||||| |||   
     gaacuuuu uccaga gguac uac uaagu gau  u
acuau        g      u     a   -     c   gc

Annotation confidence Not enough data

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Genome context

JH977717.1: 836837-836917 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from efu-mir-154

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-154

Accession	MIMAT0035039
Description	Eptesicus fuscus efu-miR-154 mature miRNA
Sequence	11 - AGAGGUCUUCCAUGAUGCAUUCACU - 35
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545