Stem-loop efu-mir-382

Accession

MI0028725

Description

Eptesicus fuscus efu-mir-382 precursor miRNA

Sequence

358 reads, 18.0 reads per million, 8 experiments

acuugaagaGAAGUUGUUCGUGGUGGAUUCGcuuuacuuaugacgAAUCAUUCACGGACAACACUUUuuucaguacc
..(((((((((.(((((((((((..(((((((.........).))))))..)))))))))))..)))))))))....

Structure

--ac         -A           UG      - uuu 
    uugaagaGA  GUUGUUCGUGG  GAUUCG c   a
    |||||||||  |||||||||||  |||||| |   c
    gacuuuUUU  CAACAGGCACU  CUAAgc g   u
ccau         CA           UA      a uau 

Annotation confidence High

Genome context

JH977717.1: 842272-842348 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from efu-mir-382

Mature efu-miR-382-5p

• Accession: MIMAT0058828
• Description: Eptesicus fuscus efu-miR-382-5p mature miRNA
• Sequence: 10 - GAAGUUGUUCGUGGUGGAUUCG - 31
• Evidence: experimental ; Illumina [1]

Mature efu-miR-382-3p

• Accession: MIMAT0035040
• Description: Eptesicus fuscus efu-miR-382-3p mature miRNA
• Sequence: 46 - AAUCAUUCACGGACAACACUUU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545