Stem-loop efu-mir-9186d-2

Accession

MI0028735

Description

Eptesicus fuscus efu-mir-9186d-2 precursor miRNA

Sequence

42025 reads, 1318.0 reads per million, 6 experiments

agggggaggUUGGCGGUAUCACUGGUACUGuuguaaugccuguccACAGUAGCAGACAUGCCGCCCUCcucccccuac
(((((((((..((((((((..(((.((((((.(..........).)))))).)))..))))))))..)))))))))..

Structure

--         UU        CA   G      u uaau 
  agggggagg  GGCGGUAU  CUG UACUGu g    g
  |||||||||  ||||||||  ||| |||||| |     
  ucccccucC  CCGCCGUA  GAC AUGACA c    c
ca         UC        CA   G      c uguc 

Annotation confidence High

Genome context

JH977753.1: 16379-16456 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from efu-mir-9186d-2

Mature efu-miR-9186d-2-5p

• Accession: MIMAT0058832
• Description: Eptesicus fuscus efu-miR-9186d-2-5p mature miRNA
• Sequence: 10 - UUGGCGGUAUCACUGGUACUG - 30
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9186d-3p

• Accession: MIMAT0035048
• Description: Eptesicus fuscus efu-miR-9186d-3p mature miRNA
• Sequence: 46 - ACAGUAGCAGACAUGCCGCCCUC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545