Stem-loop efu-mir-125a

Accession

MI0028740

Description

Eptesicus fuscus efu-mir-125a precursor miRNA

Sequence

226364 reads, 3224.0 reads per million, 8 experiments

gccccucucgaUCCCUGAGACCCUAACUUGUGAuguuuuccguuuaaauccACGGGUUAGGCUCUUGGGAGCUgcgagccgcg
((..(((.((.((((.((((.(((((((((((..((((.......)))).))))))))))).))))))))..)).)))..)).

Structure

-  cc   u  -a    U    C           Au    uc 
 gc  cuc cg  UCCC GAGA CCUAACUUGUG  guuu  c
 ||  ||| ||  |||| |||| |||||||||||  ||||  g
 cg  gag gU  AGGG UUCU GGAUUGGGCAc  uaaa  u
g  cc   c  CG    -    C           -c    uu 

Annotation confidence High

Genome context

JH977848.1: 615866-615948 [-]

Mature efu-miR-125a-5p

• Accession: MIMAT0058836
• Description: Eptesicus fuscus efu-miR-125a-5p mature miRNA
• Sequence: 12 - UCCCUGAGACCCUAACUUGUGA - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-125a-3p

• Accession: MIMAT0035053
• Description: Eptesicus fuscus efu-miR-125a-3p mature miRNA
• Sequence: 52 - ACGGGUUAGGCUCUUGGGAGCU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545