Stem-loop efu-mir-181a

Accession

MI0028741

Description

Eptesicus fuscus efu-mir-181a precursor miRNA

Sequence

1085841 reads, 11757.0 reads per million, 8 experiments

ugcuucagugAACAUUCAACGCUGUCGGUGAGUuuggaguuaaagucaaAACCAUCGACCGUUGAUUGUACCcuauggcuaa
.(((..((.(.(((.((((((..(((((((.((((.((.......)).))))))))))))))))).))).).))..)))...

Structure

--u   uc  u A   U      CU       A    g  gu 
   gcu  ag g ACA UCAACG  GUCGGUG GUuu ga  u
   |||  || | ||| ||||||  ||||||| |||| ||  a
   cgg  uc C UGU AGUUGC  CAGCUAC CAAa cu  a
aau   ua  C A   U      --       -    a  ga 

Annotation confidence High

Genome context

JH978090.1: 123043-123124 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-181a

Mature efu-miR-181a-5p

• Accession: MIMAT0058837
• Description: Eptesicus fuscus efu-miR-181a-5p mature miRNA
• Sequence: 11 - AACAUUCAACGCUGUCGGUGAGU - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-181a-3p

• Accession: MIMAT0035054
• Description: Eptesicus fuscus efu-miR-181a-3p mature miRNA
• Sequence: 50 - AACCAUCGACCGUUGAUUGUACC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545