miRBase entry: efu-mir-181a

Stem-loop efu-mir-181a

Accession

MI0028741

Description

Eptesicus fuscus efu-mir-181a precursor miRNA

Sequence

ugcuucagugaacauucaacgcugucggugaguuuggaguuaaagucaaAACCAUCGACCGUUGAUUGUACCcuauggcuaa
.(((..((.(.(((.((((((..(((((((.((((.((.......)).))))))))))))))))).))).).))..)))...

Structure

--u   uc  u a   u      cu       a    g  gu 
   gcu  ag g aca ucaacg  gucggug guuu ga  u
   |||  || | ||| ||||||  ||||||| |||| ||  a
   cgg  uc C UGU AGUUGC  CAGCUAC CAAa cu  a
aau   ua  C A   U      --       -    a  ga

Annotation confidence Not enough data

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Genome context

JH978090.1: 123043-123124 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-181a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-181a

Accession	MIMAT0035054
Description	Eptesicus fuscus efu-miR-181a mature miRNA
Sequence	50 - AACCAUCGACCGUUGAUUGUACC - 72
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545