Stem-loop efu-mir-181b

Accession

MI0028742

Description

Eptesicus fuscus efu-mir-181b precursor miRNA

Sequence

57020 reads, 573.0 reads per million, 8 experiments

gucacaaucAACAUUCAUUGCUGUCGGUGGGUugagcagugcggacgAGCUCACGGAACAAUGAAUGCAAcuguggcccc
((((((.....(((((((((...((.(((((((..((...)).....))))))).)).)))))))))....))))))...

Structure

---      aucAA         CUG  G       ---ga  a 
   gucaca     CAUUCAUUG   UC GUGGGUu     gc  
   ||||||     |||||||||   || |||||||     || g
   cggugu     GUAAGUAAC   AG CACUCGA     cg  
ccc      -cAAC         --A  G       gcagg  u 

Annotation confidence High

Genome context

JH978090.1: 123304-123383 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-181b

Mature efu-miR-181b-5p

• Accession: MIMAT0058838
• Description: Eptesicus fuscus efu-miR-181b-5p mature miRNA
• Sequence: 10 - AACAUUCAUUGCUGUCGGUGGGU - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-181b-3p

• Accession: MIMAT0035055
• Description: Eptesicus fuscus efu-miR-181b-3p mature miRNA
• Sequence: 48 - AGCUCACGGAACAAUGAAUGCAA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545