Stem-loop efu-mir-335

Accession

MI0028746

Description

Eptesicus fuscus efu-mir-335 precursor miRNA

Sequence

5942 reads, 60.0 reads per million, 8 experiments

ugggcgggggUCAAGAGCAAUAACGAAAAAUGUuugucauaaaccgUUUUUCAUUAUUGCUCCUGACCUccucucauu
((((.((((((((.(((((((((.((((((((.((......)).)))))))).))))))))).)))))))).))))..

Structure

--    c        A         C        U  gu 
  uggg gggggUCA GAGCAAUAA GAAAAAUG uu  c
  |||| |||||||| ||||||||| |||||||| ||   
  acuc ccUCCAGU CUCGUUAUU CUUUUUgc aa  a
uu    u        C         A        c  au 

Annotation confidence High

Genome context

JH977706.1: 43611-43688 [-]

Mature efu-miR-335-5p

• Accession: MIMAT0035059
• Description: Eptesicus fuscus efu-miR-335-5p mature miRNA
• Sequence: 11 - UCAAGAGCAAUAACGAAAAAUGU - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-335-3p

• Accession: MIMAT0058842
• Description: Eptesicus fuscus efu-miR-335-3p mature miRNA
• Sequence: 47 - UUUUUCAUUAUUGCUCCUGACCU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545