Stem-loop efu-mir-155

Accession

MI0028748

Description

Eptesicus fuscus efu-mir-155 precursor miRNA

Literature search

1 open access papers mention efu-mir-155
(1 sentences)

Sequence

94531 reads, 876.0 reads per million, 8 experiments

cuguaugcugUUAAUGCUAAUCGUGAUAGGGGUUUuuaccuccgacugaCUCCUACAUGUUAGCAUUAACAggguacggug
((((((.(((((((((((((.((((.((((((((.............))))))))))))))))))))))))).))))))..

Structure

--      g             U    A        Uuuac 
  cuguau cugUUAAUGCUAA CGUG UAGGGGUU     c
  |||||| ||||||||||||| |||| ||||||||     u
  ggcaug gACAAUUACGAUU GUAC AUCCUCag     c
gu      g             -    -        ucagc 

Annotation confidence High

Genome context

JH977643.1: 5709588-5709668 [+]

Mature efu-miR-155-5p

• Accession: MIMAT0035061
• Description: Eptesicus fuscus efu-miR-155-5p mature miRNA
• Sequence: 11 - UUAAUGCUAAUCGUGAUAGGGGUUU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-155-3p

• Accession: MIMAT0058843
• Description: Eptesicus fuscus efu-miR-155-3p mature miRNA
• Sequence: 50 - CUCCUACAUGUUAGCAUUAACA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545