Stem-loop efu-mir-31

Accession

MI0028751

Description

Eptesicus fuscus efu-mir-31 precursor miRNA

Sequence

45941 reads, 865.0 reads per million, 8 experiments

aacuggagaggAGGCAAGAUGCUGGCAUAGCUGUugaauugagaaccUGCUAUGCCAACAUAUUGCCAUCUcucuugucug
.((.(((((((.(((((.(((.(((((((((.(((........)))..))))))))).))).))))).))))))).))...

Structure

--a  u       A     G   C         -U   gaa 
   ac ggagagg GGCAA AUG UGGCAUAGC  GUu   u
   || ||||||| ||||| ||| |||||||||  |||    
   ug ucucUCU CCGUU UAC ACCGUAUCG  caa   u
guc  u       A     A   A         Uc   gag 

Annotation confidence High

Genome context

JH977707.1: 4846061-4846141 [+]

Mature efu-miR-31-5p

• Accession: MIMAT0058844
• Description: Eptesicus fuscus efu-miR-31-5p mature miRNA
• Sequence: 12 - AGGCAAGAUGCUGGCAUAGCUGU - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-31-3p

• Accession: MIMAT0035064
• Description: Eptesicus fuscus efu-miR-31-3p mature miRNA
• Sequence: 48 - UGCUAUGCCAACAUAUUGCCAUCU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545