Stem-loop efu-mir-507c

Accession

MI0028762

Description

Eptesicus fuscus efu-mir-507c precursor miRNA

Sequence

37928 reads, 2608.0 reads per million, 4 experiments

uguaggacucuAUUCCAAGAUGUGUCAUCCAUGuagcuaaaaauAUGUUUGGCACCUCUUUGAAUGAAguaauacaca
((((..(((.(((((.((((.((((((..(((((........)))))..)))))).)))).))))).)))..))))..

Structure

--    gg   c     C    U      UC     agc 
  ugua  acu uAUUC AAGA GUGUCA  CAUGu   u
  ||||  ||| ||||| |||| ||||||  |||||    
  acau  ugA GUAAG UUCU CACGGU  GUAua   a
ac    aa   A     U    C      UU     aaa 

Annotation confidence High

Genome context

JH977855.1: 630832-630909 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-507c

Mature efu-miR-507c-5p

• Accession: MIMAT0058851
• Description: Eptesicus fuscus efu-miR-507c-5p mature miRNA
• Sequence: 12 - AUUCCAAGAUGUGUCAUCCAUG - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-507c-3p

• Accession: MIMAT0035074
• Description: Eptesicus fuscus efu-miR-507c-3p mature miRNA
• Sequence: 45 - AUGUUUGGCACCUCUUUGAAUGAA - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545