miRBase entry: efu-mir-8908

Stem-loop efu-mir-8908

Accession

MI0028763

Description

Eptesicus fuscus efu-mir-8908 precursor miRNA

Sequence

ugcagugcccUAUUUAGGAAGGCACCAUUCACAUaauacuauauuaugaagugcgccuuccugaguagaguaauguuca
.(((.(((.((((((((((((((..((((..(((((((...))))))).)))).)))))))))))))).))).)))...

Structure

--u   g   c              AC    CA       c 
   gca ugc cUAUUUAGGAAGGC  CAUU  CAUaaua  
   ||| ||| ||||||||||||||  ||||  ||||||| u
   ugu aug gaugaguccuuccg  guga  guauuau  
acu   a   a              -c    -a       a

Annotation confidence Not enough data

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Genome context

JH977855.1: 627068-627146 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-8908

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-8908

Accession	MIMAT0035075
Description	Eptesicus fuscus efu-miR-8908 mature miRNA
Sequence	11 - UAUUUAGGAAGGCACCAUUCACAU - 34
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545