miRBase entry: efu-mir-9331

Stem-loop efu-mir-9331

Accession

MI0028770

Description

Eptesicus fuscus efu-mir-9331 precursor miRNA

Sequence

uggcuccggaCCAGGCUGUUGUUGUUCUCAACGUGguccgccgcggagccauaaaagggaacagcggcagccuccccggcggagcgcagcg
((((((((....(((((((((((((((((...((((((((...)))).))))....)))))))))))))))))......)))))).))...

Structure

---  -      --gaCC                 -AAC    -    c 
   ug gcuccg      AGGCUGUUGUUGUUCUC    GUGg uccg  
   || ||||||      |||||||||||||||||    |||| |||| c
   ac cgaggc      uccgacggcgacaaggg    uacc aggc  
gcg  g      ggcccc                 aaaa    g    g

Annotation confidence Not enough data

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Genome context

JH977615.1: 15748801-15748891 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from efu-mir-9331

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-9331

Accession	MIMAT0035079
Description	Eptesicus fuscus efu-miR-9331 mature miRNA
Sequence	11 - CCAGGCUGUUGUUGUUCUCAACGUG - 35
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545