miRBase entry: efu-mir-9333

Stem-loop efu-mir-9333

Accession

MI0028772

Description

Eptesicus fuscus efu-mir-9333 precursor miRNA

Sequence

ucagcuuagcCUCACAACAGCCCCAGUGAGGUguuaaaacaacucaucuuacuggugugggugcugagacugg
.(((((((((((((((......(((((((((((...........))))))))))))))))).)))))).))).

Structure

u   -      -      ACAGCC           uuaa 
 cag cuuagc CUCACA      CCAGUGAGGUg    a
 ||| |||||| ||||||      |||||||||||    a
 guc gagucg gggugu      ggucauucuac    c
g   a      u      ------           ucaa

Annotation confidence Not enough data

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Genome context

JH977615.1: 15745691-15745763 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from efu-mir-9333

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-9333

Accession	MIMAT0035081
Description	Eptesicus fuscus efu-miR-9333 mature miRNA
Sequence	11 - CUCACAACAGCCCCAGUGAGGU - 32
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545