Stem-loop efu-mir-9186b-1

Accession

MI0028773

Description

Eptesicus fuscus efu-mir-9186b-1 precursor miRNA

Sequence

6745 reads, 292.0 reads per million, 4 experiments

agagggaggUUGGCGACAUCACUGGUAuugagguaauggcugccaacAGUACCAGACAUGCCGCCCUCcucccccuac
((.((((((..((((.(((..(((((((((.((((.....))))..)))))))))..))).))))..)))))).))..

Structure

--  a      UU    A   CA         -a    a 
  ag gggagg  GGCG CAU  CUGGUAuug  ggua u
  || ||||||  |||| |||  |||||||||  |||| g
  uc cccucC  CCGC GUA  GACCAUGAc  ccgu g
ca  c      UC    C   CA         aa    c 

Annotation confidence High

Genome context

JH977753.1: 161363-161440 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from efu-mir-9186b-1

Mature efu-miR-9186b-1-5p

• Accession: MIMAT0058815
• Description: Eptesicus fuscus efu-miR-9186b-1-5p mature miRNA
• Sequence: 10 - UUGGCGACAUCACUGGUA - 27
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9186b-3p

• Accession: MIMAT0035022
• Description: Eptesicus fuscus efu-miR-9186b-3p mature miRNA
• Sequence: 48 - AGUACCAGACAUGCCGCCCUC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545