Stem-loop efu-mir-9186d-1

Accession

MI0028785

Description

Eptesicus fuscus efu-mir-9186d-1 precursor miRNA

Sequence

121045 reads, 5164.0 reads per million, 6 experiments

aggggguggUUGGCGGUAUCACUGGUACUGAAGuaaugccuguccACAGUAGCAGACAUGCCGCCCUCcuccccauac
..((((.((..((((((((..(((.(((((................))))).)))..))))))))..)).))))....

Structure

--ag    u  UU        CA   G     AAGuaau 
    gggg gg  GGCGGUAU  CUG UACUG       g
    |||| ||  ||||||||  ||| |||||        
    cccc cC  CCGCCGUA  GAC AUGAC       c
caua    u  UC        CA   G     Accuguc 

Annotation confidence High

Genome context

JH977721.1: 1116-1193 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from efu-mir-9186d-1

Mature efu-miR-9186d-1-5p

• Accession: MIMAT0058833
• Description: Eptesicus fuscus efu-miR-9186d-1-5p mature miRNA
• Sequence: 10 - UUGGCGGUAUCACUGGUACUGAAG - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9186d-3p

• Accession: MIMAT0035048
• Description: Eptesicus fuscus efu-miR-9186d-3p mature miRNA
• Sequence: 46 - ACAGUAGCAGACAUGCCGCCCUC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545