Stem-loop efu-mir-9186c

Accession

MI0028788

Description

Eptesicus fuscus efu-mir-9186c precursor miRNA

Sequence

19298 reads, 2212.0 reads per million, 2 experiments

agagugagggAGGCGGAAUGGCUGGUACUGAAGuaaugacugcacacAGUACCAGACAUGCCGCCCCCuucccucuac
((((.(((((.(((((.(((.(((((((((..(((.....)))...))))))))).))).))))).))))).))))..

Structure

--    u     A     A   G         -AA   a 
  agag gaggg GGCGG AUG CUGGUACUG   Gua u
  |||| ||||| ||||| ||| |||||||||   ||| g
  ucuc cuuCC CCGCC UAC GACCAUGAc   cgu a
ca    c     C     G   A         aca   c 

Annotation confidence High

Genome context

JH977721.1: 16583-16660 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9186c

Mature efu-miR-9186c-5p

• Accession: MIMAT0058864
• Description: Eptesicus fuscus efu-miR-9186c-5p mature miRNA
• Sequence: 11 - AGGCGGAAUGGCUGGUACUGAAG - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9186c-3p

• Accession: MIMAT0035095
• Description: Eptesicus fuscus efu-miR-9186c-3p mature miRNA
• Sequence: 48 - AGUACCAGACAUGCCGCCCCC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545