Stem-loop efu-mir-365-1

Accession

MI0028793

Description

Eptesicus fuscus efu-mir-365-1 precursor miRNA

Sequence

25308 reads, 247.0 reads per million, 8 experiments

cagggaaaaugAGGGACUUUUGGGGGCAGAUGUGUuuccauuccacuaucaUAAUGCCCCUAAAAAUCCUUAUugcucuugca
(((((..((((((((..(((((((((((((((((.........))).)))....))))))))))).))))))))..)))))..

Structure

--     aa        AC           ----   -   Uuu 
  caggg  aaugAGGG  UUUUGGGGGCA    GAU GUG   c
  |||||  ||||||||  |||||||||||    ||| |||   c
  guucu  uUAUUCCU  AAAAUCCCCGU    cua cac   a
ac     cg        -A           AAUa   u   cuu 

Annotation confidence High

Genome context

JH977625.1: 18500862-18500944 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-365-1

Mature efu-miR-365-1-5p

• Accession: MIMAT0058866
• Description: Eptesicus fuscus efu-miR-365-1-5p mature miRNA
• Sequence: 12 - AGGGACUUUUGGGGGCAGAUGUGU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-365-3p

• Accession: MIMAT0035099
• Description: Eptesicus fuscus efu-miR-365-3p mature miRNA
• Sequence: 52 - UAAUGCCCCUAAAAAUCCUUAU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545