miRBase entry: efu-mir-193b

Stem-loop efu-mir-193b

Accession

MI0028794

Description

Eptesicus fuscus efu-mir-193b precursor miRNA

Sequence

gucccagaauCGGGGUUUUGAGGGCGAGAUGAGUuuauguuuuauccaacuggcccacaaagucccgcuuuugggguca
(((((((((.((((((((((.((((.((.((.((.........)).)).)).)))).)))))))))).)))))))).).

Structure

- -        u          A    G  A  A  uua 
 g ucccagaa CGGGGUUUUG GGGC AG UG GU   u
 | |||||||| |||||||||| |||| || || ||   g
 c gggguuuu gcccugaaac cccg uc ac ua   u
a u        c          a    g  a  c  uuu

Annotation confidence Not enough data

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Genome context

JH977625.1: 18505696-18505774 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-193b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-193b

Accession	MIMAT0035100
Description	Eptesicus fuscus efu-miR-193b mature miRNA
Sequence	11 - CGGGGUUUUGAGGGCGAGAUGAGU - 34
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545