Stem-loop efu-mir-9339

Accession

MI0028797

Description

Eptesicus fuscus efu-mir-9339 precursor miRNA

Sequence

1511 reads, 134.0 reads per million, 3 experiments

gugcuggggcCAGAUUGAUGGUUGGCAGCUGGAUCccaggguugggcugcccagccUCUGUGUUCUGCUCAGAAUGCCC
(.((.(((((((((.....(((((((((((.((((....)))).))))).)))))))))).))))))).).........

Structure

--------- u  u     -    UUGAU      -     G    c 
         g gc ggggc CAGA     GGUUGG CAGCU GAUC c
         | || ||||| ||||     |||||| ||||| ||||  
         C CG UCUUG GUCU     ccgacc gucgg uugg a
CCCGUAAGA U  -     U    -----      c     g    g 

Annotation confidence Low

Genome context

JH977775.1: 28592-28670 [-]

Mature efu-miR-9339-5p

• Accession: MIMAT0035103
• Description: Eptesicus fuscus efu-miR-9339-5p mature miRNA
• Sequence: 11 - CAGAUUGAUGGUUGGCAGCUGGAUC - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9339-3p

• Accession: MIMAT0058870
• Description: Eptesicus fuscus efu-miR-9339-3p mature miRNA
• Sequence: 57 - UCUGUGUUCUGCUCAGAAUGCCC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545