miRBase entry: efu-mir-9186b-5

Stem-loop efu-mir-9186b-5

Accession

MI0028800

Description

Eptesicus fuscus efu-mir-9186b-5 precursor miRNA

Sequence

agggggaggugagcggcaucacugguacugagguaauggcugcucacAGUACCAGACAUGCCGCCCUCcucccccuac
(((((((((.(.(((((((..(((((((((.((((.....))))..)))))))))..))))))).).)))))))))..

Structure

--         u a       ca         -a    a 
  agggggagg g gcggcau  cugguacug  ggua u
  ||||||||| | |||||||  |||||||||  |||| g
  ucccccucC C CGCCGUA  GACCAUGAc  ucgu g
ca         U C       CA         ac    c

Annotation confidence Not enough data

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Genome context

JH977753.1: 163900-163977 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from efu-mir-9186b-5

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-9186b

Accession	MIMAT0035022
Description	Eptesicus fuscus efu-miR-9186b mature miRNA
Sequence	48 - AGUACCAGACAUGCCGCCCUC - 68
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545