Stem-loop efu-mir-9279a-4

Accession

MI0028810

Description

Eptesicus fuscus efu-mir-9279a-4 precursor miRNA

Sequence

3173 reads, 64.0 reads per million, 8 experiments

gucugugugaggccacgCGUCCCUGGGUCCGGGUGAggccauguguccCUGGAUCCGGGUGAGGCCUugcacaccuag
...(((((((((((.....((((((((((((((.((.((...)).)))))))))))))).))))))))))))).....

Structure

--guc           acgCG  -            U  g  c 
     ugugugaggcc     UC CCUGGGUCCGGG GA gc  
     |||||||||||     || |||||||||||| || || a
     acacguUCCGG     AG GGGCCUAGGUCc cu ug  
gaucc           -----  U            -  g  u 

Annotation confidence Low

Genome context

ALEH01164984.1: 93-170 [-]

Mature efu-miR-9279a-4-5p

• Accession: MIMAT0058757
• Description: Eptesicus fuscus efu-miR-9279a-4-5p mature miRNA
• Sequence: 18 - CGUCCCUGGGUCCGGGUGA - 36
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9279a-3p

• Accession: MIMAT0034917
• Description: Eptesicus fuscus efu-miR-9279a-3p mature miRNA
• Sequence: 49 - CUGGAUCCGGGUGAGGCCU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545