Stem-loop efu-mir-9345

Accession

MI0028811

Description

Eptesicus fuscus efu-mir-9345 precursor miRNA

Sequence

135 reads, 5.0 reads per million, 6 experiments

uccugaaccugcuuccCACACACCUAGGCUAGGAUACcccuuguaggaggcggcUUCAAUGCCGGGGGUCGGUGACCAGguccuccgga
(((.(((((((.((.((..((.(((.(((...((..((((((....)))).))..))...))).))))).)).)).)))))..)).)))

Structure

   u  --     c  c  AC  A   A   UAG  UA  -    g 
ucc ga  accug uu cC  AC CCU GGC   GA  Cc ccuu u
||| ||  ||||| || ||  || ||| |||   ||  || ||||  
agg cu  ugGAC AG GG  UG GGG CCG   CU  gg ggag a
   c  cc     C  U  -C  -   G   UAA  Uc  c    g 

Annotation confidence Low

Genome context

JH977714.1: 3055029-3055117 [+]

Mature efu-miR-9345-5p

• Accession: MIMAT0058873
• Description: Eptesicus fuscus efu-miR-9345-5p mature miRNA
• Sequence: 17 - CACACACCUAGGCUAGGAUAC - 37
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9345-3p

• Accession: MIMAT0035114
• Description: Eptesicus fuscus efu-miR-9345-3p mature miRNA
• Sequence: 55 - UUCAAUGCCGGGGGUCGGUGACCAG - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545